Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033268_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2205404 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 3665 | 0.0 | 41.392094 | 1 |
GTATCAA | 6015 | 0.0 | 27.059027 | 1 |
CGCAACG | 65 | 8.6885947E-4 | 26.523289 | 24 |
TAACGGC | 105 | 7.7273944E-7 | 26.270687 | 36 |
GTGGTAT | 1635 | 0.0 | 22.403454 | 1 |
TGGTATC | 1655 | 0.0 | 21.250683 | 2 |
ATCAACG | 7725 | 0.0 | 21.112194 | 3 |
TCAACGC | 7750 | 0.0 | 20.955109 | 4 |
CAACGCA | 7955 | 0.0 | 20.415096 | 5 |
TATCAAC | 7990 | 0.0 | 20.411978 | 2 |
TACACCG | 205 | 1.7553248E-9 | 20.183577 | 5 |
AACGCAG | 8225 | 0.0 | 19.91262 | 6 |
CGCGGTA | 110 | 8.271739E-4 | 18.807423 | 43 |
CGACGTT | 115 | 0.0010909004 | 18.048222 | 67 |
TTAACGG | 175 | 3.2280677E-6 | 17.732714 | 35 |
ACACCGT | 295 | 2.910383E-11 | 17.532343 | 6 |
GTACATG | 6265 | 0.0 | 16.823084 | 1 |
CGCAGAG | 9725 | 0.0 | 16.770355 | 8 |
ACGCAGA | 9705 | 0.0 | 16.769386 | 7 |
GACGTTA | 145 | 2.6688047E-4 | 16.699791 | 68 |