Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033267_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1394885 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 2570 | 0.0 | 38.708656 | 1 |
GTGGTAT | 1070 | 0.0 | 30.991043 | 1 |
CGCTAGC | 45 | 0.0046335906 | 30.652359 | 47 |
GTATCAA | 4545 | 0.0 | 29.488087 | 1 |
TACCTGG | 975 | 0.0 | 27.940805 | 2 |
GTACCTG | 1050 | 0.0 | 27.633682 | 1 |
ATAACGC | 150 | 3.45608E-11 | 27.587126 | 3 |
TGGTATC | 1200 | 0.0 | 27.587126 | 2 |
TATGCCG | 50 | 0.0077531105 | 27.587124 | 43 |
TCTGTCG | 470 | 0.0 | 26.413202 | 8 |
GTACCGG | 145 | 6.9303496E-10 | 26.204351 | 1 |
ATCAACG | 5710 | 0.0 | 23.130186 | 3 |
TATCAAC | 5770 | 0.0 | 23.068954 | 2 |
TCAACGC | 5840 | 0.0 | 22.733397 | 4 |
CAACGCA | 5955 | 0.0 | 22.236471 | 5 |
AACGCAG | 6230 | 0.0 | 21.476334 | 6 |
GTCTCAC | 645 | 0.0 | 21.421457 | 1 |
TAGACTG | 290 | 0.0 | 21.403803 | 5 |
TATAACG | 180 | 8.631105E-9 | 21.073496 | 2 |
GTATAAC | 300 | 0.0 | 20.72526 | 1 |