Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033255_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2834313 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | 11130 | 0.39268775184674376 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 4270 | 0.0 | 38.7656 | 1 |
GTATCAA | 8000 | 0.0 | 31.340988 | 1 |
ATCAACG | 9965 | 0.0 | 25.652046 | 3 |
TCAACGC | 10050 | 0.0 | 25.4639 | 4 |
CGACCGT | 110 | 1.1440734E-6 | 25.115225 | 21 |
CAACGCA | 10270 | 0.0 | 24.885372 | 5 |
TATCAAC | 10130 | 0.0 | 24.335155 | 2 |
AACGCAG | 10650 | 0.0 | 24.320854 | 6 |
GTGGTAT | 1970 | 0.0 | 23.477552 | 1 |
TGGTATC | 1955 | 0.0 | 22.40893 | 2 |
ACGCAGA | 12135 | 0.0 | 21.090637 | 7 |
TCGAACG | 115 | 4.5814726E-5 | 21.014362 | 53 |
CGCAGAG | 12280 | 0.0 | 20.729551 | 8 |
GAGTACT | 8430 | 0.0 | 20.120443 | 12 |
AGAGTAC | 12025 | 0.0 | 19.65576 | 11 |
AGTACTT | 8840 | 0.0 | 19.187597 | 13 |
GCAGAGT | 12810 | 0.0 | 19.095835 | 9 |
CAGAGTA | 12880 | 0.0 | 18.698225 | 10 |
GTACTTT | 9190 | 0.0 | 18.275488 | 14 |
GTACATG | 7680 | 0.0 | 17.885592 | 1 |