Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033242_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1907111 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 3345 | 0.0 | 42.344692 | 1 |
GACGCGT | 40 | 0.0026034694 | 34.481857 | 10 |
GTATCAA | 5775 | 0.0 | 28.714447 | 1 |
GTGGTAT | 1295 | 0.0 | 28.011139 | 1 |
CGCGCGA | 50 | 0.0077560577 | 27.585487 | 21 |
TGGTATC | 1345 | 0.0 | 25.893438 | 2 |
TTGCGCG | 75 | 0.0019996082 | 22.987904 | 18 |
ATCAACG | 7375 | 0.0 | 22.489185 | 3 |
TCAACGC | 7450 | 0.0 | 22.12393 | 4 |
TATCAAC | 7525 | 0.0 | 22.086716 | 2 |
CAACGCA | 7655 | 0.0 | 21.576498 | 5 |
AACGCAG | 7920 | 0.0 | 20.898094 | 6 |
ACGCAGA | 9045 | 0.0 | 18.29883 | 7 |
GTACATG | 5165 | 0.0 | 18.260117 | 1 |
CGCAGAG | 9190 | 0.0 | 17.935068 | 8 |
GAGTACT | 6710 | 0.0 | 17.42079 | 12 |
AGAGTAC | 9095 | 0.0 | 17.326233 | 11 |
TACATGG | 5325 | 0.0 | 17.289495 | 2 |
TACCTGG | 1170 | 0.0 | 17.09357 | 2 |
GCAGAGT | 9630 | 0.0 | 16.900766 | 9 |