Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033226_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2981135 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 7225 | 0.0 | 25.77944 | 1 |
TTACGCG | 70 | 0.001315091 | 24.7044 | 69 |
GTATCAA | 10285 | 0.0 | 21.166977 | 1 |
CGAACGA | 85 | 0.0041343486 | 20.283379 | 42 |
TACACCG | 210 | 2.3683242E-9 | 19.703852 | 5 |
GTACATG | 7580 | 0.0 | 17.96179 | 1 |
ATCAACG | 12135 | 0.0 | 17.617373 | 3 |
TCAACGC | 12190 | 0.0 | 17.509598 | 4 |
GAGTACT | 8190 | 0.0 | 17.430332 | 12 |
GTTACGC | 160 | 2.8903365E-5 | 17.29308 | 68 |
CAACGCA | 12415 | 0.0 | 17.220041 | 5 |
TATCAAC | 12595 | 0.0 | 17.110828 | 2 |
TACATGG | 7695 | 0.0 | 16.84878 | 2 |
AACGCAG | 12870 | 0.0 | 16.638042 | 6 |
AGAGTAC | 12020 | 0.0 | 16.523697 | 11 |
AGTACTT | 8620 | 0.0 | 16.520836 | 13 |
ACATGGG | 8020 | 0.0 | 15.564079 | 3 |
GTACTTT | 9160 | 0.0 | 15.35868 | 14 |
ACACCGT | 295 | 9.5187715E-9 | 15.195344 | 6 |
GTACGAC | 185 | 1.02680184E-4 | 14.911023 | 3 |