Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033216_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 972706 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 1650 | 0.0 | 42.94049 | 1 |
GTATCAA | 3040 | 0.0 | 29.673176 | 1 |
TCCGAAC | 60 | 5.4415356E-4 | 28.731966 | 3 |
TGGTATC | 630 | 0.0 | 25.72195 | 2 |
GTCTCGC | 230 | 0.0 | 25.545721 | 1 |
TACCTGG | 625 | 0.0 | 25.376072 | 2 |
GTGGTAT | 670 | 0.0 | 25.276585 | 1 |
CTCGTAT | 90 | 2.135082E-4 | 22.98557 | 39 |
TACCGCT | 90 | 2.135082E-4 | 22.98557 | 7 |
ATCAACG | 3965 | 0.0 | 22.695717 | 3 |
GTACCTG | 660 | 0.0 | 22.517576 | 1 |
TATCAAC | 4080 | 0.0 | 22.225021 | 2 |
TCAACGC | 4065 | 0.0 | 22.137398 | 4 |
CAACGCA | 4120 | 0.0 | 21.841873 | 5 |
AGCGTTC | 80 | 0.0029096894 | 21.548975 | 37 |
ATTAGAC | 210 | 1.0186341E-10 | 21.343746 | 3 |
AACGCAG | 4240 | 0.0 | 21.305023 | 6 |
TCTGTCG | 305 | 0.0 | 20.347885 | 8 |
GTACATG | 2255 | 0.0 | 20.231333 | 1 |
CTGTCGC | 325 | 0.0 | 20.156578 | 9 |