Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033215_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 5113852 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 7665 | 0.0 | 35.385612 | 1 |
GTATCAA | 12510 | 0.0 | 27.398296 | 1 |
ATCAACG | 15590 | 0.0 | 21.563864 | 3 |
TCAACGC | 15710 | 0.0 | 21.355253 | 4 |
CAACGCA | 16030 | 0.0 | 20.971968 | 5 |
GTACATG | 19645 | 0.0 | 20.577993 | 1 |
TATCAAC | 16560 | 0.0 | 20.446512 | 2 |
AACGCAG | 16675 | 0.0 | 20.222988 | 6 |
GCGAACT | 690 | 0.0 | 19.989225 | 28 |
GTGGTAT | 3665 | 0.0 | 19.703415 | 1 |
TACATGG | 19270 | 0.0 | 19.700338 | 2 |
CGAACTA | 735 | 0.0 | 18.765394 | 29 |
ACATGGG | 19555 | 0.0 | 18.619764 | 3 |
AGCGAAC | 890 | 0.0 | 17.434422 | 27 |
ACGCAGA | 19555 | 0.0 | 17.138813 | 7 |
TATAACG | 305 | 4.7293724E-11 | 16.957409 | 2 |
CTAGCGG | 245 | 1.6008926E-8 | 16.888855 | 29 |
CGCAGAG | 19800 | 0.0 | 16.822256 | 8 |
CGTATGG | 250 | 2.0549123E-8 | 16.55043 | 31 |
GAGTACT | 11045 | 0.0 | 16.295853 | 12 |