Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033212_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3096002 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 4725 | 0.0 | 41.15783 | 1 |
GTATCAA | 8170 | 0.0 | 28.242317 | 1 |
TGGTATC | 2015 | 0.0 | 26.867882 | 2 |
GTGGTAT | 2180 | 0.0 | 26.777876 | 1 |
GACGCGT | 70 | 0.001338 | 24.631327 | 10 |
ATCAACG | 9830 | 0.0 | 23.012253 | 3 |
TATACCG | 105 | 2.2909528E-5 | 22.988867 | 5 |
TCGCGTA | 75 | 0.0019994015 | 22.988867 | 46 |
TCAACGC | 9900 | 0.0 | 22.884373 | 4 |
CAACGCA | 10155 | 0.0 | 22.377642 | 5 |
TATCAAC | 10395 | 0.0 | 22.02685 | 2 |
AACGCAG | 10450 | 0.0 | 21.71328 | 6 |
GTACATG | 7960 | 0.0 | 21.00285 | 1 |
TACATGG | 7825 | 0.0 | 20.35947 | 2 |
ACATGGG | 7950 | 0.0 | 19.34535 | 3 |
ACGCAGA | 12295 | 0.0 | 18.286682 | 7 |
CGCAGAG | 12355 | 0.0 | 18.114143 | 8 |
CGAACGT | 115 | 0.0011142943 | 17.99158 | 54 |
GAGTACT | 9045 | 0.0 | 17.347054 | 12 |
AGAGTAC | 12680 | 0.0 | 16.807074 | 11 |