Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033205_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 851386 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATAACG | 75 | 8.767529E-10 | 41.37713 | 2 |
GGTATCA | 2060 | 0.0 | 37.063522 | 1 |
ATAACGC | 90 | 5.2150426E-9 | 34.480938 | 3 |
TATCACG | 75 | 1.6757749E-6 | 32.182213 | 2 |
TACCTGG | 635 | 0.0 | 29.322374 | 2 |
GTACCTG | 655 | 0.0 | 29.009686 | 1 |
TAACGCA | 110 | 3.680543E-8 | 28.21168 | 4 |
GTATCAA | 3090 | 0.0 | 24.661125 | 2 |
GTATAAC | 155 | 1.4988473E-9 | 24.517862 | 1 |
TCACGCA | 105 | 2.2896398E-5 | 22.987295 | 4 |
CGGACAA | 90 | 2.1336955E-4 | 22.987293 | 28 |
GTGGTAT | 895 | 0.0 | 22.774591 | 1 |
TCTGTCG | 235 | 0.0 | 22.009111 | 8 |
TCGCTCT | 240 | 1.8189894E-12 | 21.55059 | 4 |
GTCTCGC | 215 | 1.364242E-10 | 20.88943 | 1 |
CTGTCGC | 250 | 1.8189894E-12 | 20.688566 | 9 |
TGGTATC | 905 | 0.0 | 20.574263 | 2 |
ATCAACG | 3780 | 0.0 | 20.34193 | 4 |
ACGGACA | 85 | 0.004132518 | 20.282907 | 27 |
TCAACGC | 3775 | 0.0 | 20.277534 | 5 |