Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033191_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2677367 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 3330 | 0.0 | 32.968212 | 1 |
GGTATCA | 2105 | 0.0 | 32.23251 | 1 |
TCAACGC | 3250 | 0.0 | 31.944818 | 4 |
ATCAACG | 3345 | 0.0 | 31.326057 | 3 |
CAACGCA | 3400 | 0.0 | 30.534346 | 5 |
AACGCAG | 3625 | 0.0 | 28.757414 | 6 |
GTACATG | 7525 | 0.0 | 28.239288 | 1 |
TACATGG | 7680 | 0.0 | 26.141565 | 2 |
TATCAAC | 4095 | 0.0 | 25.719292 | 2 |
TAGCGCG | 130 | 1.0925507E-5 | 25.29567 | 4 |
ACATGGG | 8005 | 0.0 | 24.242964 | 3 |
ACGCAGA | 4425 | 0.0 | 23.13386 | 7 |
CGCAGAG | 4390 | 0.0 | 22.997406 | 8 |
CCGATCG | 125 | 2.439497E-4 | 22.539595 | 9 |
CATGGGG | 5215 | 0.0 | 20.989065 | 4 |
CGCGCGT | 165 | 6.911093E-5 | 19.921358 | 7 |
GAGTACA | 5735 | 0.0 | 19.30715 | 1 |
GTATTAG | 1170 | 0.0 | 18.927608 | 1 |
GTATAGA | 1150 | 0.0 | 17.617908 | 1 |
AGTACAT | 5685 | 0.0 | 17.616274 | 2 |