Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033186_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3161910 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 2555 | 0.0 | 40.010357 | 1 |
GTATCAA | 4325 | 0.0 | 36.815796 | 1 |
TCAACGC | 4530 | 0.0 | 34.120678 | 4 |
ATCAACG | 4675 | 0.0 | 32.967632 | 3 |
CAACGCA | 4890 | 0.0 | 31.320501 | 5 |
AACGCAG | 5015 | 0.0 | 30.713581 | 6 |
GTACATG | 10310 | 0.0 | 28.100887 | 1 |
TATCAAC | 5930 | 0.0 | 26.718882 | 2 |
TACATGG | 10180 | 0.0 | 26.694584 | 2 |
ACGCAGA | 5795 | 0.0 | 26.093773 | 7 |
CGCAGAG | 6190 | 0.0 | 24.35318 | 8 |
ACATGGG | 10805 | 0.0 | 24.092426 | 3 |
TATACCG | 230 | 4.123649E-9 | 22.469055 | 5 |
CATGGGG | 7460 | 0.0 | 21.223207 | 4 |
GCAGAGT | 7325 | 0.0 | 19.746237 | 9 |
GAGTACA | 7340 | 0.0 | 18.997622 | 1 |
AGTACAT | 7335 | 0.0 | 17.81918 | 2 |
GTGTATA | 1660 | 0.0 | 17.594915 | 1 |
AGAGTAC | 6270 | 0.0 | 17.039434 | 10-11 |
GTATAGA | 1165 | 0.0 | 16.98349 | 1 |