Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033183_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2003923 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCAACGC | 2160 | 0.0 | 34.360504 | 4 |
ATCAACG | 2200 | 0.0 | 33.317883 | 3 |
GTATCAA | 2400 | 0.0 | 32.38182 | 1 |
CAACGCA | 2310 | 0.0 | 32.1293 | 5 |
AACGCAG | 2435 | 0.0 | 30.664442 | 6 |
GTACATG | 5470 | 0.0 | 27.382204 | 1 |
TATCAAC | 2870 | 0.0 | 26.04009 | 2 |
TACATGG | 5560 | 0.0 | 25.107817 | 2 |
ACGCAGA | 2975 | 0.0 | 25.09846 | 7 |
ACATGGG | 5360 | 0.0 | 24.194674 | 3 |
CGCAGAG | 3140 | 0.0 | 23.331503 | 8 |
GGTATCA | 1630 | 0.0 | 22.250088 | 1 |
GTACCGG | 150 | 3.3141354E-5 | 21.915112 | 6 |
CATGGGG | 3920 | 0.0 | 20.01182 | 4 |
ACGGGTC | 190 | 9.090274E-6 | 19.778463 | 5 |
GTACACG | 240 | 1.5460319E-7 | 19.625349 | 1 |
CCTATAC | 835 | 0.0 | 19.132332 | 3 |
CTATACT | 1070 | 0.0 | 18.877342 | 4 |
TATACCG | 125 | 0.0064334306 | 18.78954 | 5 |
ATGTCGC | 275 | 3.2376192E-8 | 18.784384 | 6 |