Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033168_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3332364 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 5455 | 0.0 | 27.292086 | 1 |
GTACATG | 9200 | 0.0 | 26.52689 | 1 |
TCAACGC | 5320 | 0.0 | 26.138298 | 4 |
ATCAACG | 5365 | 0.0 | 25.92217 | 3 |
TACATGG | 9200 | 0.0 | 25.190878 | 2 |
CAACGCA | 5525 | 0.0 | 25.083052 | 5 |
ACATGGG | 8895 | 0.0 | 24.667223 | 3 |
GGTATCA | 3785 | 0.0 | 24.396896 | 1 |
AACGCAG | 5895 | 0.0 | 23.33917 | 6 |
TATCAAC | 6435 | 0.0 | 22.28104 | 2 |
TAGACCG | 155 | 4.2572123E-5 | 21.215685 | 5 |
CGCAGAG | 6500 | 0.0 | 21.022348 | 8 |
ACGCAGA | 6575 | 0.0 | 20.925386 | 7 |
GTACCGT | 260 | 1.7034836E-8 | 19.866484 | 6 |
CATGGGG | 5820 | 0.0 | 19.372492 | 4 |
GAGTACA | 6320 | 0.0 | 18.860268 | 1 |
ACGTGCG | 200 | 1.4198766E-5 | 18.782856 | 9 |
GTACGAC | 260 | 3.6838537E-7 | 18.070745 | 3 |
GTATAGA | 1450 | 0.0 | 17.220758 | 1 |
GTACTAG | 745 | 0.0 | 17.074654 | 1 |