Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033162_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4094925 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 5040 | 0.0 | 36.17008 | 1 |
TCAACGC | 5100 | 0.0 | 33.897877 | 4 |
CAACGCA | 5390 | 0.0 | 32.07406 | 5 |
GGTATCA | 3225 | 0.0 | 31.98773 | 1 |
ATCAACG | 5440 | 0.0 | 31.958218 | 3 |
AACGCAG | 5865 | 0.0 | 29.465254 | 6 |
GTACATG | 12120 | 0.0 | 28.721748 | 1 |
TACATGG | 12180 | 0.0 | 27.212666 | 2 |
TATCAAC | 6645 | 0.0 | 27.168488 | 2 |
ACATGGG | 12600 | 0.0 | 25.32089 | 3 |
ACGCAGA | 6980 | 0.0 | 24.489298 | 7 |
CGCAGAG | 7130 | 0.0 | 23.908232 | 8 |
CATGGGG | 8495 | 0.0 | 21.34611 | 4 |
GAGTACA | 9000 | 0.0 | 19.522497 | 1 |
GCAGAGT | 8900 | 0.0 | 18.520277 | 9 |
AGTACAT | 9130 | 0.0 | 17.919987 | 2 |
TCTATAC | 1835 | 0.0 | 17.412157 | 3 |
CATGGGA | 4100 | 0.0 | 17.301664 | 4 |
TATACCG | 275 | 6.6408757E-7 | 17.082922 | 5 |
TAGCGCG | 175 | 0.00233726 | 16.106754 | 4 |