Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033161_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3804217 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 3705 | 0.0 | 32.928703 | 1 |
TCAACGC | 3590 | 0.0 | 32.452908 | 4 |
ATCAACG | 3770 | 0.0 | 31.031305 | 3 |
CAACGCA | 3805 | 0.0 | 30.865694 | 5 |
GTACATG | 9720 | 0.0 | 30.14305 | 1 |
TACATGG | 9770 | 0.0 | 28.678135 | 2 |
AACGCAG | 4180 | 0.0 | 28.198643 | 6 |
ACATGGG | 9865 | 0.0 | 27.146873 | 3 |
GGTATCA | 2345 | 0.0 | 26.11341 | 1 |
TATCAAC | 4705 | 0.0 | 25.37893 | 2 |
ACGCAGA | 4905 | 0.0 | 23.073254 | 7 |
GAGTACA | 6765 | 0.0 | 22.351173 | 1 |
CATGGGG | 6920 | 0.0 | 21.52036 | 4 |
CGCAGAG | 5240 | 0.0 | 21.419193 | 8 |
GTATAGA | 1635 | 0.0 | 20.455198 | 1 |
AGTACAT | 7030 | 0.0 | 19.860964 | 2 |
TATACCG | 285 | 9.64812E-7 | 16.483362 | 5 |
GTCTAGG | 1165 | 0.0 | 16.173244 | 1 |
ACACCGT | 610 | 0.0 | 16.166658 | 6 |
GCAGAGT | 6755 | 0.0 | 16.059172 | 9 |