Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033160_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3221366 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCAACGC | 3615 | 0.0 | 29.24011 | 4 |
ATCAACG | 3765 | 0.0 | 28.076475 | 3 |
GTACATG | 7340 | 0.0 | 27.53608 | 1 |
CAACGCA | 3895 | 0.0 | 27.259165 | 5 |
GTATCAA | 4140 | 0.0 | 26.856693 | 1 |
TAGACCG | 105 | 7.447367E-5 | 26.845623 | 5 |
GGTATCA | 2835 | 0.0 | 26.755537 | 1 |
AACGCAG | 4055 | 0.0 | 26.17383 | 6 |
TACATGG | 7405 | 0.0 | 26.02554 | 2 |
ACATGGG | 7565 | 0.0 | 24.158262 | 3 |
ACGCAGA | 4690 | 0.0 | 22.229507 | 7 |
TATCAAC | 4870 | 0.0 | 22.199327 | 2 |
CGCAGAG | 4675 | 0.0 | 21.698107 | 8 |
GAGTACA | 5275 | 0.0 | 19.4704 | 1 |
CATGGGG | 4930 | 0.0 | 19.249048 | 4 |
CCGATCG | 130 | 0.00807923 | 18.062437 | 9 |
AGTACAT | 5320 | 0.0 | 17.40586 | 2 |
GCAGAGT | 6005 | 0.0 | 16.501337 | 9 |
TCTGTCG | 780 | 0.0 | 16.256193 | 8 |
GTATACG | 295 | 1.3417302E-6 | 15.970513 | 1 |