Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033154_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2640374 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCAACGC | 2850 | 0.0 | 36.756756 | 4 |
ATCAACG | 3005 | 0.0 | 34.867428 | 3 |
GGTATCA | 1905 | 0.0 | 34.36575 | 1 |
CAACGCA | 3085 | 0.0 | 34.109085 | 5 |
GTATCAA | 3205 | 0.0 | 34.09306 | 1 |
AACGCAG | 3170 | 0.0 | 33.776363 | 6 |
GTACATG | 6675 | 0.0 | 28.788227 | 1 |
TATCAAC | 3895 | 0.0 | 27.52012 | 2 |
TACATGG | 6735 | 0.0 | 27.014462 | 2 |
ACGCAGA | 3850 | 0.0 | 26.957344 | 7 |
CGCAGAG | 4030 | 0.0 | 25.403702 | 8 |
ACATGGG | 6860 | 0.0 | 25.136307 | 3 |
GAGTACA | 4975 | 0.0 | 19.975395 | 1 |
CGCTACG | 145 | 6.510701E-4 | 19.488987 | 1 |
CATGGGG | 4395 | 0.0 | 19.346254 | 4 |
TATACCG | 170 | 8.666561E-5 | 19.343111 | 5 |
GCAGAGT | 5095 | 0.0 | 19.171879 | 9 |
GTCTCGC | 540 | 0.0 | 18.316038 | 1 |
GTATAGG | 1180 | 0.0 | 17.562109 | 1 |
CTGTCGC | 700 | 0.0 | 16.772102 | 9 |