Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033151_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2776051 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCAACGC | 4060 | 0.0 | 24.181347 | 4 |
GTACATG | 6120 | 0.0 | 24.178751 | 1 |
ATCAACG | 4180 | 0.0 | 23.606758 | 3 |
CAACGCA | 4265 | 0.0 | 22.908916 | 5 |
GTATCAA | 4710 | 0.0 | 22.712273 | 1 |
TACATGG | 6225 | 0.0 | 22.279781 | 2 |
AACGCAG | 4475 | 0.0 | 22.035463 | 6 |
ACATGGG | 6485 | 0.0 | 20.722843 | 3 |
GGTATCA | 3310 | 0.0 | 20.359339 | 1 |
TATCAAC | 5225 | 0.0 | 19.615458 | 2 |
ACGCAGA | 5140 | 0.0 | 18.362375 | 7 |
CGCAGAG | 5150 | 0.0 | 18.05351 | 8 |
GACCGTC | 210 | 2.161088E-5 | 17.888197 | 7 |
GAGTACA | 4825 | 0.0 | 17.775822 | 1 |
TATACTG | 1740 | 0.0 | 17.277899 | 5 |
GTCTTAC | 1050 | 0.0 | 17.05493 | 1 |
TACACTG | 2245 | 0.0 | 16.94841 | 5 |
GTCCTAG | 1090 | 0.0 | 16.861404 | 1 |
GTGTAGG | 1175 | 0.0 | 16.04271 | 1 |
CATGGGG | 3955 | 0.0 | 16.034208 | 4 |