Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033149_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3370713 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 2720 | 0.0 | 30.653574 | 1 |
TCAACGC | 3500 | 0.0 | 29.929983 | 4 |
ATCAACG | 3520 | 0.0 | 29.7639 | 3 |
GTATCAA | 3790 | 0.0 | 29.581112 | 1 |
CAACGCA | 3775 | 0.0 | 27.750065 | 5 |
GTACATG | 8045 | 0.0 | 26.583157 | 1 |
AACGCAG | 4010 | 0.0 | 26.232393 | 6 |
TACATGG | 7975 | 0.0 | 25.290873 | 2 |
ACATGGG | 8160 | 0.0 | 23.548368 | 3 |
TATCAAC | 4615 | 0.0 | 23.53301 | 2 |
CTGTCGC | 895 | 0.0 | 21.51271 | 9 |
ACGCAGA | 4835 | 0.0 | 21.46496 | 7 |
CGCAGAG | 4995 | 0.0 | 20.589365 | 8 |
GTATTAG | 1750 | 0.0 | 18.034891 | 1 |
CATGGGG | 5570 | 0.0 | 17.45761 | 4 |
GAGTACA | 5670 | 0.0 | 17.446688 | 1 |
GGGTACG | 190 | 1.989755E-4 | 17.354864 | 1 |
CGTGTCG | 245 | 4.1990534E-6 | 17.25086 | 9 |
GTCTCGC | 700 | 0.0 | 16.823593 | 1 |
GTATATA | 3065 | 0.0 | 16.598545 | 1 |