Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033146_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3306110 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCAACGC | 3830 | 0.0 | 32.13837 | 4 |
CAACGCA | 3920 | 0.0 | 31.51987 | 5 |
ATCAACG | 4045 | 0.0 | 30.435677 | 3 |
GTATCAA | 4225 | 0.0 | 30.333836 | 1 |
AACGCAG | 4195 | 0.0 | 29.441133 | 6 |
GGTATCA | 2865 | 0.0 | 28.451593 | 1 |
TAGACCG | 110 | 1.02182596E-4 | 25.625557 | 5 |
ACGCAGA | 4785 | 0.0 | 25.614704 | 7 |
GTACATG | 7735 | 0.0 | 25.340672 | 1 |
CGCAGAG | 4780 | 0.0 | 25.248526 | 8 |
TATCAAC | 5160 | 0.0 | 24.055305 | 2 |
TACATGG | 7905 | 0.0 | 23.553204 | 2 |
ACATGGG | 8210 | 0.0 | 21.291193 | 3 |
GCAGAGT | 6155 | 0.0 | 18.768858 | 9 |
GAGTACA | 5835 | 0.0 | 18.734076 | 1 |
CTGTCGC | 745 | 0.0 | 18.279844 | 9 |
CATGGGG | 5205 | 0.0 | 17.059347 | 4 |
GTACTAG | 710 | 0.0 | 16.59078 | 1 |
ATTATAC | 2045 | 0.0 | 16.543957 | 3 |
TACCGCG | 200 | 3.0137997E-4 | 16.436102 | 8 |