Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033145_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3092240 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 2495 | 0.0 | 32.295006 | 1 |
GTATCAA | 3360 | 0.0 | 30.992945 | 1 |
TCAACGC | 3245 | 0.0 | 29.96501 | 4 |
ATCAACG | 3350 | 0.0 | 29.032852 | 3 |
GTACATG | 8125 | 0.0 | 28.475277 | 1 |
CAACGCA | 3540 | 0.0 | 27.732416 | 5 |
TACATGG | 8210 | 0.0 | 27.085396 | 2 |
TACACCG | 410 | 0.0 | 26.35049 | 5 |
AACGCAG | 3740 | 0.0 | 25.863829 | 6 |
ACATGGG | 8335 | 0.0 | 25.705343 | 3 |
TATCAAC | 4175 | 0.0 | 23.985037 | 2 |
ACACCGT | 590 | 0.0 | 22.284517 | 6 |
ACGCAGA | 4380 | 0.0 | 21.977432 | 7 |
GTCGTAC | 310 | 1.2732926E-11 | 21.280224 | 1 |
CGCAGAG | 4555 | 0.0 | 20.926897 | 8 |
CATGGGG | 5785 | 0.0 | 18.675974 | 4 |
GTGTAGG | 1140 | 0.0 | 18.186855 | 1 |
GTACCGT | 260 | 3.7061545E-7 | 18.060255 | 6 |
CGTACAC | 375 | 2.0190782E-10 | 17.541265 | 3 |
GAGTACA | 5645 | 0.0 | 17.278906 | 1 |