Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033141_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4079125 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTACATG | 12565 | 0.0 | 27.779474 | 1 |
GTATCAA | 6115 | 0.0 | 27.5775 | 1 |
TACATGG | 12600 | 0.0 | 26.451988 | 2 |
TCAACGC | 6225 | 0.0 | 25.733839 | 4 |
GGTATCA | 4345 | 0.0 | 25.368475 | 1 |
ATCAACG | 6345 | 0.0 | 25.325844 | 3 |
ACATGGG | 12860 | 0.0 | 24.917984 | 3 |
CAACGCA | 6670 | 0.0 | 24.016964 | 5 |
AACGCAG | 6865 | 0.0 | 23.326754 | 6 |
TATCAAC | 7365 | 0.0 | 22.275902 | 2 |
CATGGGG | 9220 | 0.0 | 20.278774 | 4 |
ACGCAGA | 8200 | 0.0 | 19.128155 | 7 |
GAGTACA | 8380 | 0.0 | 18.381123 | 1 |
GTATAGA | 1500 | 0.0 | 18.213987 | 1 |
GTATAGG | 1430 | 0.0 | 17.787954 | 1 |
CGCAGAG | 8670 | 0.0 | 17.657898 | 8 |
AGTACAT | 8705 | 0.0 | 16.41676 | 2 |
TCTATAC | 1415 | 0.0 | 15.606694 | 3 |
GTATTAG | 1995 | 0.0 | 15.583655 | 1 |
TATACCG | 275 | 1.2539569E-5 | 15.374443 | 5 |