Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033138_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2749271 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 4095 | 0.0 | 32.44352 | 1 |
TCAACGC | 4045 | 0.0 | 30.548552 | 4 |
ATCAACG | 4070 | 0.0 | 30.364222 | 3 |
CAACGCA | 4155 | 0.0 | 29.738178 | 5 |
GGTATCA | 2515 | 0.0 | 27.91136 | 1 |
AACGCAG | 4450 | 0.0 | 27.754648 | 6 |
GTACATG | 8240 | 0.0 | 26.586334 | 1 |
TACATGG | 8215 | 0.0 | 25.35513 | 2 |
TATCAAC | 5000 | 0.0 | 25.296005 | 2 |
TAGACCG | 115 | 1.3815159E-4 | 24.512243 | 5 |
ACATGGG | 8475 | 0.0 | 23.508612 | 3 |
ACGCAGA | 5260 | 0.0 | 23.123524 | 7 |
CGCAGAG | 5355 | 0.0 | 22.53832 | 8 |
GTACCGA | 130 | 3.1788487E-4 | 21.674442 | 6 |
ACCGCGT | 155 | 4.2676664E-5 | 21.20871 | 8 |
GAGTACA | 6010 | 0.0 | 19.83256 | 1 |
ATAACCG | 155 | 0.0010365137 | 18.186502 | 5 |
GCAGAGT | 6375 | 0.0 | 18.121862 | 9 |
CATGGGG | 5350 | 0.0 | 17.652071 | 4 |
TCTACGC | 190 | 2.0180494E-4 | 17.32264 | 2 |