Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033132_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2146023 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGGACCG | 55 | 0.0027241714 | 34.164806 | 5 |
TCAACGC | 2715 | 0.0 | 27.857864 | 4 |
GTACATG | 4750 | 0.0 | 27.668682 | 1 |
ATCAACG | 2750 | 0.0 | 27.507795 | 3 |
TACATGG | 4650 | 0.0 | 26.58568 | 2 |
GTATCAA | 3135 | 0.0 | 26.145058 | 1 |
CAACGCA | 2960 | 0.0 | 25.868876 | 5 |
ACATGGG | 4660 | 0.0 | 25.206743 | 3 |
AACGCAG | 3115 | 0.0 | 24.7244 | 6 |
GGACCGA | 175 | 1.6607373E-7 | 24.151516 | 6 |
GGTATCA | 2085 | 0.0 | 23.27068 | 1 |
TATCAAC | 3455 | 0.0 | 22.040016 | 2 |
ACGGACC | 150 | 3.3140983E-5 | 21.915266 | 8 |
ACGCAGA | 3415 | 0.0 | 21.864843 | 7 |
AGGACCG | 195 | 4.700487E-7 | 21.68151 | 5 |
CGCAGAG | 3400 | 0.0 | 21.546942 | 8 |
GTCTCGC | 490 | 0.0 | 21.149714 | 1 |
TAGGTCG | 115 | 0.0039711706 | 20.424612 | 5 |
GACCGAC | 120 | 0.005089732 | 19.567202 | 7 |
TACGCGA | 60 | 0.0050919177 | 19.566288 | 80-81 |