Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033124_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1775925 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 2580 | 0.0 | 32.513367 | 1 |
GGTATCA | 1810 | 0.0 | 32.024933 | 1 |
TCAACGC | 2680 | 0.0 | 29.9744 | 4 |
ATCAACG | 2785 | 0.0 | 29.020342 | 3 |
GTACATG | 6165 | 0.0 | 28.894846 | 1 |
TACATGG | 5895 | 0.0 | 28.634624 | 2 |
CAACGCA | 2845 | 0.0 | 28.235193 | 5 |
AACGCAG | 2940 | 0.0 | 27.472553 | 6 |
ACATGGG | 6060 | 0.0 | 26.673811 | 3 |
TATCAAC | 3485 | 0.0 | 23.746016 | 2 |
ACGCAGA | 3565 | 0.0 | 22.26102 | 7 |
CGCAGAG | 3605 | 0.0 | 22.014017 | 8 |
CATGGGG | 4325 | 0.0 | 21.615044 | 4 |
GTCTAGG | 370 | 0.0 | 20.378862 | 1 |
TACACCG | 280 | 1.8117134E-9 | 20.132612 | 5 |
CTACGCT | 170 | 8.662691E-5 | 19.343643 | 4 |
TACTTCG | 230 | 2.297469E-6 | 18.37522 | 9 |
TATACCG | 130 | 0.00806421 | 18.06773 | 5 |
GCAGAGT | 4300 | 0.0 | 17.909904 | 9 |
GAGTACA | 4245 | 0.0 | 17.762497 | 1 |