Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033121_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2064494 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCAACGC | 2205 | 0.0 | 29.397526 | 4 |
GGTATCA | 1700 | 0.0 | 28.825998 | 1 |
ATCAACG | 2255 | 0.0 | 28.545694 | 3 |
GTACATG | 5170 | 0.0 | 27.797726 | 1 |
AACGCAG | 2375 | 0.0 | 27.678104 | 6 |
CAACGCA | 2375 | 0.0 | 27.490393 | 5 |
GTATCAA | 2475 | 0.0 | 27.034176 | 1 |
TACATGG | 4995 | 0.0 | 26.72955 | 2 |
ACATGGG | 4920 | 0.0 | 25.784887 | 3 |
ACGCAGA | 2750 | 0.0 | 23.562336 | 7 |
TATCAAC | 2900 | 0.0 | 22.371231 | 2 |
CATGGGG | 3680 | 0.0 | 21.826725 | 4 |
CGCAGAG | 2930 | 0.0 | 21.794842 | 8 |
GAGTACA | 3495 | 0.0 | 18.874733 | 1 |
GGACGCG | 125 | 0.0064483685 | 18.782026 | 9 |
TGTACCG | 230 | 2.2921868E-6 | 18.379955 | 5 |
TATACTG | 1265 | 0.0 | 17.080362 | 5 |
TAGACAG | 1060 | 0.0 | 16.395535 | 5 |
GTGTAGG | 845 | 0.0 | 16.171164 | 1 |
GCAGAGT | 3900 | 0.0 | 16.13328 | 9 |