Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033114_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3457449 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 2800 | 0.0 | 35.65187 | 1 |
GTATCAA | 4310 | 0.0 | 33.86795 | 1 |
TCAACGC | 4425 | 0.0 | 31.416878 | 4 |
CAACGCA | 4600 | 0.0 | 30.220797 | 5 |
ATCAACG | 4710 | 0.0 | 29.619856 | 3 |
AACGCAG | 4890 | 0.0 | 28.520065 | 6 |
GTACATG | 10415 | 0.0 | 26.8554 | 1 |
TACATGG | 10420 | 0.0 | 24.899773 | 2 |
TATCAAC | 5730 | 0.0 | 24.60881 | 2 |
ACATGGG | 10975 | 0.0 | 22.897955 | 3 |
ACGCAGA | 6020 | 0.0 | 22.698616 | 7 |
CGCAGAG | 6155 | 0.0 | 21.819618 | 8 |
GTACTAG | 700 | 0.0 | 19.507627 | 1 |
CATGGGG | 7490 | 0.0 | 19.062346 | 4 |
GAGTACA | 7515 | 0.0 | 18.296091 | 1 |
CTAGTAC | 710 | 0.0 | 17.201345 | 3 |
ACCGTCC | 360 | 2.226443E-9 | 16.95704 | 8 |
GCAGAGT | 7700 | 0.0 | 16.770699 | 9 |
TATACCG | 200 | 3.0116687E-4 | 16.437664 | 5 |
AGTACAT | 7870 | 0.0 | 16.424116 | 2 |