Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033106_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1698950 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 1550 | 0.0 | 33.733494 | 1 |
GTACGAC | 135 | 1.333683E-8 | 31.319407 | 3 |
TCAACGC | 2220 | 0.0 | 30.47204 | 4 |
GTATCAA | 2350 | 0.0 | 29.866781 | 1 |
ATCAACG | 2310 | 0.0 | 28.878931 | 3 |
CAACGCA | 2415 | 0.0 | 28.01156 | 5 |
AACGCAG | 2510 | 0.0 | 26.757898 | 6 |
GTACATG | 4475 | 0.0 | 26.105299 | 1 |
TACATGG | 4540 | 0.0 | 25.264307 | 2 |
TATCAAC | 2730 | 0.0 | 24.967712 | 2 |
ACATGGG | 4675 | 0.0 | 23.715656 | 3 |
ATAACGG | 100 | 0.001766301 | 23.483332 | 8 |
CGCAGAG | 2840 | 0.0 | 22.491077 | 8 |
ACGCAGA | 2920 | 0.0 | 22.357418 | 7 |
TGTACGA | 190 | 3.635796E-7 | 22.26703 | 2 |
CATGGGG | 3100 | 0.0 | 19.548796 | 4 |
GTGTACG | 220 | 1.4574689E-6 | 19.27036 | 1 |
GCGTAGT | 150 | 8.1687793E-4 | 18.84213 | 1 |
TAAGCCG | 155 | 0.0010368953 | 18.184927 | 5 |
CTGTCGC | 440 | 0.0 | 18.14621 | 9 |