Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033102_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1727758 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 1495 | 0.0 | 36.85774 | 1 |
GTATCAA | 2405 | 0.0 | 35.44439 | 1 |
TCAACGC | 2425 | 0.0 | 33.125343 | 4 |
ATCAACG | 2465 | 0.0 | 32.594418 | 3 |
CAACGCA | 2620 | 0.0 | 30.65902 | 5 |
AACGCAG | 2700 | 0.0 | 29.392431 | 6 |
GTACATG | 5865 | 0.0 | 27.864126 | 1 |
TATCAAC | 2995 | 0.0 | 27.625257 | 2 |
TACATGG | 5915 | 0.0 | 26.386017 | 2 |
ACATGGG | 6090 | 0.0 | 24.457159 | 3 |
ACGCAGA | 3265 | 0.0 | 24.162321 | 7 |
CGCAGAG | 3390 | 0.0 | 23.13286 | 8 |
GTATAGA | 650 | 0.0 | 21.01206 | 1 |
CATGGGG | 4125 | 0.0 | 20.840261 | 4 |
GAGTACA | 4145 | 0.0 | 19.315607 | 1 |
GCAGAGT | 4000 | 0.0 | 19.25291 | 9 |
ACCGTAC | 150 | 8.342325E-4 | 18.783329 | 8 |
TCTGTCG | 460 | 0.0 | 18.374996 | 8 |
TAGACTG | 630 | 0.0 | 17.8951 | 5 |
TCTATAC | 700 | 0.0 | 17.451765 | 3 |