Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033094_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3455964 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 4030 | 0.0 | 35.817245 | 1 |
TCAACGC | 3775 | 0.0 | 35.738964 | 4 |
ATCAACG | 3915 | 0.0 | 34.46094 | 3 |
CAACGCA | 4040 | 0.0 | 33.627415 | 5 |
AACGCAG | 4320 | 0.0 | 31.115103 | 6 |
GGTATCA | 2545 | 0.0 | 30.48281 | 1 |
TATCAAC | 4860 | 0.0 | 28.72746 | 2 |
GTACATG | 9115 | 0.0 | 27.699787 | 1 |
TCGTACG | 85 | 6.811612E-4 | 27.6521 | 2 |
TACATGG | 9160 | 0.0 | 26.275532 | 2 |
ACGCAGA | 5200 | 0.0 | 25.48794 | 7 |
CGCAGAG | 5305 | 0.0 | 24.467497 | 8 |
ACATGGG | 9735 | 0.0 | 23.46807 | 3 |
TATACCG | 210 | 9.5225187E-7 | 20.14653 | 5 |
CGTACGC | 120 | 0.005060811 | 19.586905 | 3 |
CATGGGG | 6655 | 0.0 | 19.42503 | 4 |
GAGTACA | 6560 | 0.0 | 19.423355 | 1 |
TACACCG | 495 | 0.0 | 18.99336 | 5 |
GCAGAGT | 6725 | 0.0 | 18.605312 | 9 |
AGTACAT | 6525 | 0.0 | 17.866858 | 2 |