Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033083_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2673909 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCAACGC | 2925 | 0.0 | 33.587803 | 4 |
GTATCAA | 3185 | 0.0 | 32.471844 | 1 |
GGTATCA | 2060 | 0.0 | 31.720592 | 1 |
CAACGCA | 3115 | 0.0 | 31.538519 | 5 |
ATCAACG | 3125 | 0.0 | 31.287762 | 3 |
AACGCAG | 3390 | 0.0 | 28.975742 | 6 |
GTACATG | 6890 | 0.0 | 27.633093 | 1 |
TATCAAC | 3740 | 0.0 | 26.645597 | 2 |
TACATGG | 6815 | 0.0 | 26.141743 | 2 |
ACATGGG | 6955 | 0.0 | 24.939653 | 3 |
ACGCAGA | 3960 | 0.0 | 24.211573 | 7 |
TACACCG | 275 | 1.8189894E-12 | 23.930315 | 5 |
CGCAGAG | 4080 | 0.0 | 23.176016 | 8 |
CATGGGG | 4990 | 0.0 | 21.666487 | 4 |
TATACCG | 195 | 1.1310702E-5 | 19.284502 | 5 |
CCGCGCA | 125 | 0.006372694 | 18.820715 | 9 |
GGACGCG | 255 | 2.9586408E-7 | 18.451683 | 9 |
GCAGAGT | 5130 | 0.0 | 18.252058 | 9 |
GAGTACA | 4765 | 0.0 | 18.15301 | 1 |
CCGGTCG | 130 | 0.007990745 | 18.096842 | 9 |