Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033065_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 5047565 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 6565 | 0.0 | 38.094707 | 1 |
TCAACGC | 6285 | 0.0 | 37.84713 | 4 |
GGTATCA | 3530 | 0.0 | 36.88865 | 1 |
ATCAACG | 6555 | 0.0 | 36.50336 | 3 |
CAACGCA | 6525 | 0.0 | 36.31168 | 5 |
AACGCAG | 7350 | 0.0 | 32.294395 | 6 |
TATCAAC | 8350 | 0.0 | 29.275229 | 2 |
GTACATG | 14200 | 0.0 | 27.345093 | 1 |
ACGCAGA | 8555 | 0.0 | 27.087395 | 7 |
CGCAGAG | 8630 | 0.0 | 26.599972 | 8 |
TACATGG | 14100 | 0.0 | 26.171822 | 2 |
ACATGGG | 14365 | 0.0 | 24.805689 | 3 |
CATGGGG | 9295 | 0.0 | 20.93817 | 4 |
GCAGAGT | 10725 | 0.0 | 20.441082 | 9 |
GAGTACA | 10540 | 0.0 | 18.598726 | 1 |
TATACTG | 2735 | 0.0 | 18.391739 | 5 |
GTATAGG | 1970 | 0.0 | 18.374361 | 1 |
AGAGTAC | 9040 | 0.0 | 17.026245 | 10-11 |
ATACCGC | 485 | 1.8189894E-12 | 16.475185 | 6 |
AGTACAT | 10965 | 0.0 | 16.420015 | 2 |