Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033064_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3657675 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 4805 | 0.0 | 31.996315 | 1 |
TCAACGC | 4575 | 0.0 | 31.85565 | 4 |
ATCAACG | 4725 | 0.0 | 31.043356 | 3 |
GGTATCA | 3345 | 0.0 | 29.79788 | 1 |
CAACGCA | 5015 | 0.0 | 29.15488 | 5 |
AACGCAG | 5150 | 0.0 | 28.566555 | 6 |
GTACATG | 9420 | 0.0 | 27.500862 | 1 |
TATCAAC | 5785 | 0.0 | 25.761538 | 2 |
TACATGG | 9740 | 0.0 | 25.388828 | 2 |
ACGCAGA | 5980 | 0.0 | 23.89489 | 7 |
ACATGGG | 9615 | 0.0 | 23.860878 | 3 |
CGCAGAG | 6110 | 0.0 | 22.946587 | 8 |
GAGTACA | 6810 | 0.0 | 19.400137 | 1 |
CATGGGG | 7070 | 0.0 | 19.28388 | 4 |
GCAGAGT | 7510 | 0.0 | 17.544159 | 9 |
GTCTAGC | 655 | 0.0 | 17.227234 | 1 |
CCGGTCG | 330 | 1.3616955E-8 | 17.11125 | 9 |
AGTACAT | 7030 | 0.0 | 16.518002 | 2 |
TCTATAC | 1525 | 0.0 | 16.338865 | 3 |
ACGACCG | 175 | 0.0023254761 | 16.118887 | 5 |