SRR1033063_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1033063_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	129490
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4749	3.6674646690864163	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	326	0.2517568924241254	No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	313	0.24171750714340876	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	304	0.234767163487528	No Hit
GAAAACAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	235	0.18148119545910882	No Hit
GAAACAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	220	0.1698972893659742	No Hit
ACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	145	0.11197775890030119	No Hit
CTCCTACACCGGTTAACTTCAATGGTGCGTCTATTTTTGGGAGCTGCCAT	134	0.10348289443200248	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	134	0.10348289443200248	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGTCT	20	0.0021556313	70.52467	4
TACAAGA	30	1.3642172E-4	62.6886	2
CCTAGTC	25	0.0052183275	56.419735	3
TCCTAGT	25	0.0052183275	56.419735	2
TAACAAC	160	0.0	47.034653	1
GAGAACA	290	0.0	45.412766	1
GTACAAA	105	2.1827873E-11	44.794907	1
GTACATA	75	1.4588841E-7	43.899006	1
CGTATCA	60	8.802644E-5	39.15007	94
CTGTCCT	50	0.0016903108	37.627716	9
TACATAA	50	0.0016935299	37.61316	2
TACACTG	50	0.0016935299	37.61316	5
ATCTCTA	50	0.0016967539	37.598606	7
GGAAACA	195	0.0	36.1805	1
AGAACAA	305	0.0	35.455025	2
CTCTTAC	55	0.002698362	34.207016	1
GAAAACA	365	0.0	32.215515	1
AATCAAT	30	0.0041637025	31.320055	68-69
ACGCATC	30	0.0041637025	31.320055	54-55
CGCATCC	30	0.0041637025	31.320055	56-57