Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033055_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4628925 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 5255 | 0.0 | 34.712227 | 1 |
TCAACGC | 5030 | 0.0 | 34.580696 | 4 |
ATCAACG | 5135 | 0.0 | 33.965145 | 3 |
CAACGCA | 5325 | 0.0 | 33.107807 | 5 |
GGTATCA | 3465 | 0.0 | 32.970573 | 1 |
AACGCAG | 5715 | 0.0 | 30.593754 | 6 |
TATCAAC | 6245 | 0.0 | 28.304493 | 2 |
GTACATG | 11560 | 0.0 | 26.882343 | 1 |
TACATGG | 11325 | 0.0 | 26.027311 | 2 |
ACGCAGA | 6700 | 0.0 | 25.605238 | 7 |
CGCAGAG | 6795 | 0.0 | 24.780481 | 8 |
ACATGGG | 11620 | 0.0 | 24.112383 | 3 |
CATGGGG | 7945 | 0.0 | 19.822157 | 4 |
GCAGAGT | 8770 | 0.0 | 18.399246 | 9 |
GAGTACA | 8445 | 0.0 | 16.53409 | 1 |
CCTATAC | 1815 | 0.0 | 15.799858 | 3 |
AGTACAT | 8340 | 0.0 | 15.219407 | 2 |
AGAGTAC | 7305 | 0.0 | 15.109303 | 10-11 |
GTATTAG | 2260 | 0.0 | 14.769758 | 1 |
GTATATA | 3820 | 0.0 | 14.030235 | 1 |