Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033049_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3502118 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCAACGC | 3830 | 0.0 | 36.329502 | 4 |
CAACGCA | 4000 | 0.0 | 34.90302 | 5 |
GTATCAA | 4120 | 0.0 | 34.800686 | 1 |
ATCAACG | 4030 | 0.0 | 34.409912 | 3 |
GGTATCA | 2450 | 0.0 | 33.386303 | 1 |
AACGCAG | 4435 | 0.0 | 31.37003 | 6 |
GTACATG | 8730 | 0.0 | 29.454948 | 1 |
TATCAAC | 5000 | 0.0 | 28.486504 | 2 |
TACATGG | 8985 | 0.0 | 27.937643 | 2 |
CGCAGAG | 5175 | 0.0 | 25.905931 | 8 |
ACGCAGA | 5335 | 0.0 | 25.72559 | 7 |
ACATGGG | 9345 | 0.0 | 25.352325 | 3 |
CATGGGG | 6530 | 0.0 | 21.164143 | 4 |
ACACCGT | 615 | 0.0 | 19.106527 | 6 |
TATACTG | 2175 | 0.0 | 19.019102 | 5 |
GCAGAGT | 6740 | 0.0 | 18.705559 | 9 |
CTATACT | 1975 | 0.0 | 16.898874 | 4 |
AGAGTAC | 5450 | 0.0 | 16.277502 | 10-11 |
GAGTACA | 6210 | 0.0 | 16.199715 | 1 |
CCTATAC | 1490 | 0.0 | 16.089792 | 3 |