Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033046_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3070232 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 2700 | 0.0 | 37.78866 | 1 |
GTATCAA | 4080 | 0.0 | 34.572166 | 1 |
TCAACGC | 4195 | 0.0 | 32.72243 | 4 |
CAACGCA | 4380 | 0.0 | 31.341341 | 5 |
ATCAACG | 4390 | 0.0 | 31.268929 | 3 |
AACGCAG | 4720 | 0.0 | 29.175213 | 6 |
TATCAAC | 5120 | 0.0 | 26.994299 | 2 |
GTACATG | 9325 | 0.0 | 26.874716 | 1 |
TACATGG | 9375 | 0.0 | 25.1224 | 2 |
ACGCAGA | 5695 | 0.0 | 23.520506 | 7 |
CGCAGAG | 5750 | 0.0 | 23.154705 | 8 |
ACATGGG | 10060 | 0.0 | 22.617367 | 3 |
CGCTATA | 180 | 5.6588615E-6 | 20.893547 | 2 |
GAGTACA | 6885 | 0.0 | 20.009176 | 1 |
AGTACAT | 6745 | 0.0 | 19.166615 | 2 |
CATGGGG | 7215 | 0.0 | 18.50447 | 4 |
GCAGAGT | 6880 | 0.0 | 18.260275 | 9 |
TACACCG | 360 | 2.1918822E-9 | 16.97656 | 5 |
CCGGTCG | 325 | 2.1325286E-7 | 15.925526 | 9 |
ACACCGT | 535 | 0.0 | 15.81274 | 6 |