Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033037_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3106064 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 4135 | 0.0 | 36.382072 | 1 |
GGTATCA | 2625 | 0.0 | 36.177204 | 1 |
TCAACGC | 4430 | 0.0 | 32.683224 | 4 |
ATCAACG | 4450 | 0.0 | 32.535812 | 3 |
CAACGCA | 4570 | 0.0 | 31.683012 | 5 |
AACGCAG | 4830 | 0.0 | 29.876326 | 6 |
GTACATG | 10065 | 0.0 | 28.165436 | 1 |
TATCAAC | 5290 | 0.0 | 27.902615 | 2 |
TACATGG | 10200 | 0.0 | 27.098677 | 2 |
ACATGGG | 10730 | 0.0 | 25.146822 | 3 |
ACGCAGA | 5810 | 0.0 | 24.514128 | 7 |
CGCAGAG | 6125 | 0.0 | 22.583094 | 8 |
CATGGGG | 8050 | 0.0 | 21.840052 | 4 |
GAGTACA | 7080 | 0.0 | 19.78773 | 1 |
TAAGTCG | 195 | 1.1384964E-5 | 19.270073 | 94 |
GTATAGA | 1160 | 0.0 | 19.04815 | 1 |
GTATTAG | 1395 | 0.0 | 18.872383 | 1 |
GCAGAGT | 7115 | 0.0 | 18.252335 | 9 |
AGTACAT | 7555 | 0.0 | 17.359638 | 2 |
TATACTG | 2000 | 0.0 | 17.158716 | 5 |