Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033032_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4942555 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 5570 | 0.0 | 34.77452 | 1 |
TCAACGC | 5245 | 0.0 | 34.32641 | 4 |
CAACGCA | 5490 | 0.0 | 32.794205 | 5 |
ATCAACG | 5580 | 0.0 | 32.34984 | 3 |
GGTATCA | 3820 | 0.0 | 31.629248 | 1 |
AACGCAG | 5890 | 0.0 | 30.561214 | 6 |
TATCAAC | 6855 | 0.0 | 27.155815 | 2 |
GTACATG | 12845 | 0.0 | 25.876432 | 1 |
TACATGG | 12745 | 0.0 | 24.896544 | 2 |
ACGCAGA | 7190 | 0.0 | 24.64409 | 7 |
CGCAGAG | 7465 | 0.0 | 23.3144 | 8 |
ACATGGG | 13360 | 0.0 | 22.800463 | 3 |
CATGGGG | 10190 | 0.0 | 19.836699 | 4 |
GAGTACA | 9425 | 0.0 | 19.802876 | 1 |
AGTACAT | 9760 | 0.0 | 17.965284 | 2 |
GCAGAGT | 9605 | 0.0 | 17.43679 | 9 |
CCTATAC | 1675 | 0.0 | 17.40011 | 3 |
GTATATA | 3370 | 0.0 | 15.764045 | 1 |
AGAGTAC | 8090 | 0.0 | 15.414995 | 10-11 |
CTATACT | 2260 | 0.0 | 15.392118 | 4 |