Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033031_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4517039 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 3845 | 0.0 | 37.782574 | 1 |
GTATCAA | 6100 | 0.0 | 36.532375 | 1 |
TCAACGC | 6080 | 0.0 | 35.260284 | 4 |
ATCAACG | 6325 | 0.0 | 33.820145 | 3 |
CAACGCA | 6435 | 0.0 | 33.168594 | 5 |
AACGCAG | 6920 | 0.0 | 30.904316 | 6 |
TATCAAC | 7500 | 0.0 | 28.834759 | 2 |
GTACATG | 13930 | 0.0 | 28.417793 | 1 |
TACATGG | 13905 | 0.0 | 27.453945 | 2 |
ACATGGG | 14610 | 0.0 | 25.453695 | 3 |
ACGCAGA | 8330 | 0.0 | 25.165668 | 7 |
CGCAGAG | 8790 | 0.0 | 23.441183 | 8 |
CATGGGG | 11425 | 0.0 | 22.550123 | 4 |
GAGTACA | 9920 | 0.0 | 19.668253 | 1 |
GCAGAGT | 10160 | 0.0 | 19.125732 | 9 |
AGTACAT | 10310 | 0.0 | 17.555847 | 2 |
GTATAGA | 1415 | 0.0 | 16.280546 | 1 |
TATACTG | 2330 | 0.0 | 16.141869 | 5 |
CAGAGTA | 9480 | 0.0 | 15.935985 | 10-11 |
ATGGGGG | 6310 | 0.0 | 15.42271 | 5 |