Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033024_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3290056 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 4085 | 0.0 | 36.484303 | 1 |
TCAACGC | 4235 | 0.0 | 33.083256 | 4 |
ATCAACG | 4295 | 0.0 | 32.621094 | 3 |
CAACGCA | 4475 | 0.0 | 31.203897 | 5 |
GGTATCA | 3005 | 0.0 | 30.665527 | 1 |
AACGCAG | 4665 | 0.0 | 30.22845 | 6 |
TATCAAC | 4965 | 0.0 | 29.165556 | 2 |
GTACATG | 10875 | 0.0 | 26.804098 | 1 |
TACATGG | 10990 | 0.0 | 25.58246 | 2 |
TAGACCG | 155 | 1.5436544E-6 | 24.266308 | 5 |
ACATGGG | 11000 | 0.0 | 24.149115 | 3 |
ACGCAGA | 5810 | 0.0 | 24.110134 | 7 |
CGCAGAG | 6160 | 0.0 | 22.528452 | 8 |
GAGTACA | 7045 | 0.0 | 21.355404 | 1 |
GTATAGA | 1105 | 0.0 | 20.422918 | 1 |
CATGGGG | 8890 | 0.0 | 19.885271 | 4 |
GCAGAGT | 7295 | 0.0 | 18.187515 | 9 |
AGTACAT | 7700 | 0.0 | 18.134457 | 2 |
TAGGTCG | 185 | 1.6465732E-4 | 17.789827 | 5 |
TATACCG | 175 | 0.0023245665 | 16.119762 | 5 |