Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033020_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2077095 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 1685 | 0.0 | 34.877247 | 1 |
GTATCAA | 2725 | 0.0 | 34.678608 | 1 |
TCAACGC | 2710 | 0.0 | 33.65535 | 4 |
CAACGCA | 2765 | 0.0 | 32.98589 | 5 |
ATCAACG | 2770 | 0.0 | 32.92635 | 3 |
CCGCGTA | 60 | 0.004138808 | 31.368736 | 9 |
AACGCAG | 3010 | 0.0 | 30.295877 | 6 |
GTACATG | 6380 | 0.0 | 29.549883 | 1 |
TACATGG | 6295 | 0.0 | 28.305126 | 2 |
TATCAAC | 3590 | 0.0 | 25.536524 | 2 |
ACATGGG | 6810 | 0.0 | 25.198076 | 3 |
ACGCAGA | 3590 | 0.0 | 24.48474 | 7 |
CGCAGAG | 3785 | 0.0 | 22.871693 | 8 |
CATGGGG | 4865 | 0.0 | 20.87337 | 4 |
TATACTG | 1230 | 0.0 | 20.257803 | 5 |
GAGTACA | 4755 | 0.0 | 19.972525 | 1 |
AGTACAT | 4790 | 0.0 | 18.746468 | 2 |
GCAGAGT | 4410 | 0.0 | 18.56517 | 9 |
GTGTAGG | 875 | 0.0 | 17.731194 | 1 |
TCTGTCG | 510 | 0.0 | 17.527895 | 8 |