Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033015_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2933198 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 2215 | 0.0 | 33.746918 | 1 |
TCAACGC | 3120 | 0.0 | 32.543034 | 4 |
GTATCAA | 3430 | 0.0 | 32.07248 | 1 |
ATCAACG | 3220 | 0.0 | 31.678366 | 3 |
CAACGCA | 3315 | 0.0 | 30.912865 | 5 |
GTACATG | 7565 | 0.0 | 29.642868 | 1 |
AACGCAG | 3525 | 0.0 | 28.665802 | 6 |
TACATGG | 7680 | 0.0 | 27.481724 | 2 |
TATCAAC | 3990 | 0.0 | 26.507484 | 2 |
ACATGGG | 8165 | 0.0 | 25.043322 | 3 |
ACGCAGA | 4280 | 0.0 | 23.389084 | 7 |
CGCAGAG | 4460 | 0.0 | 22.463144 | 8 |
CATGGGG | 5600 | 0.0 | 20.145687 | 4 |
GAGTACA | 5440 | 0.0 | 19.185133 | 1 |
CTGTCGC | 700 | 0.0 | 18.145674 | 9 |
GCAGAGT | 5425 | 0.0 | 17.777124 | 9 |
GTCGTAC | 135 | 0.009979468 | 17.411934 | 1 |
AGTACAT | 5530 | 0.0 | 16.915577 | 2 |
ACCGACC | 195 | 2.454228E-4 | 16.88454 | 8 |
ACGCGTT | 130 | 7.2365347E-6 | 16.292093 | 10-11 |