Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033014_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1850543 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 1680 | 0.0 | 32.463295 | 1 |
GTATCAA | 2300 | 0.0 | 31.88898 | 1 |
TCAACGC | 2180 | 0.0 | 31.051268 | 4 |
ATCAACG | 2240 | 0.0 | 30.849112 | 3 |
CAACGCA | 2275 | 0.0 | 29.960442 | 5 |
AACGCAG | 2395 | 0.0 | 28.256907 | 6 |
GTACATG | 5490 | 0.0 | 25.606056 | 1 |
TATCAAC | 2695 | 0.0 | 25.466394 | 2 |
ACCGTTC | 210 | 1.4169927E-9 | 24.640665 | 8 |
TACATGG | 5560 | 0.0 | 24.518652 | 2 |
ACATGGG | 5680 | 0.0 | 23.00752 | 3 |
ACGCAGA | 2950 | 0.0 | 22.462843 | 7 |
TACACCG | 255 | 5.6024874E-10 | 22.120893 | 5 |
ACACCGT | 350 | 0.0 | 21.484217 | 6 |
CGCAGAG | 3165 | 0.0 | 20.659513 | 8 |
GGACCGT | 215 | 1.1955963E-6 | 19.673048 | 6 |
TATATCG | 120 | 0.005060977 | 19.58621 | 5 |
CATGGGG | 3850 | 0.0 | 19.047466 | 4 |
GAGTACA | 4040 | 0.0 | 18.96925 | 1 |
TACTCCG | 295 | 7.147719E-8 | 17.527998 | 5 |