Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033002_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3832174 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 5110 | 0.0 | 37.61931 | 1 |
GGTATCA | 3165 | 0.0 | 37.57121 | 1 |
TCAACGC | 5505 | 0.0 | 33.639763 | 4 |
ATCAACG | 5680 | 0.0 | 32.603325 | 3 |
CAACGCA | 5720 | 0.0 | 32.29274 | 5 |
AACGCAG | 6075 | 0.0 | 30.405674 | 6 |
GTACATG | 12290 | 0.0 | 28.300114 | 1 |
TATCAAC | 6805 | 0.0 | 27.627413 | 2 |
TACATGG | 12210 | 0.0 | 27.022766 | 2 |
ACATGGG | 12705 | 0.0 | 25.230377 | 3 |
ACGCAGA | 7230 | 0.0 | 25.093275 | 7 |
CGCAGAG | 7550 | 0.0 | 23.967468 | 8 |
CATGGGG | 8165 | 0.0 | 20.26285 | 4 |
GCAGAGT | 8900 | 0.0 | 19.433416 | 9 |
TAGGTCG | 150 | 8.2938926E-4 | 18.800455 | 5 |
GAGTACA | 8970 | 0.0 | 17.81537 | 1 |
CATGGGA | 4075 | 0.0 | 17.070574 | 4 |
AGAGTAC | 7690 | 0.0 | 16.470928 | 10-11 |
CTACACT | 1760 | 0.0 | 16.290379 | 4 |
ACCGCGT | 260 | 7.3307074E-6 | 16.269623 | 8 |