Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032996_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1072839 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 1075 | 0.0 | 32.792973 | 1 |
GTATCAA | 1520 | 0.0 | 29.37704 | 1 |
ACCGCGT | 65 | 0.006153299 | 28.923738 | 8 |
GTACATG | 3475 | 0.0 | 26.240671 | 1 |
TCAACGC | 1600 | 0.0 | 25.851797 | 4 |
ATCAACG | 1605 | 0.0 | 25.771263 | 3 |
TACATGG | 3540 | 0.0 | 24.69663 | 2 |
CAACGCA | 1715 | 0.0 | 24.665287 | 5 |
ATACCGT | 135 | 1.4570645E-5 | 24.370928 | 6 |
AACGCAG | 1750 | 0.0 | 23.903404 | 6 |
ACATGGG | 3610 | 0.0 | 22.91572 | 3 |
TCTGTCG | 250 | 4.3655746E-10 | 22.560513 | 8 |
TATCAAC | 1895 | 0.0 | 22.32345 | 2 |
GACCGCG | 150 | 3.2905267E-5 | 21.933834 | 7 |
GAGTACA | 2605 | 0.0 | 21.652176 | 1 |
GTCTCGC | 275 | 1.4351826E-9 | 20.510513 | 1 |
CTATCGC | 115 | 0.0039590118 | 20.434296 | 9 |
CATACCG | 165 | 6.857063E-5 | 19.93985 | 5 |
CATGGGG | 2460 | 0.0 | 19.68023 | 4 |
TATAACG | 120 | 0.005061879 | 19.584694 | 2 |