Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032993_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 6454314 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 9300 | 0.0 | 33.05275 | 1 |
TCAACGC | 9150 | 0.0 | 31.539885 | 4 |
ATCAACG | 9505 | 0.0 | 30.609156 | 3 |
GTACATG | 20470 | 0.0 | 30.216965 | 1 |
CAACGCA | 9635 | 0.0 | 30.049349 | 5 |
AACGCAG | 9815 | 0.0 | 29.497808 | 6 |
GGTATCA | 6130 | 0.0 | 29.4431 | 1 |
TACATGG | 20675 | 0.0 | 28.212336 | 2 |
TATCAAC | 10925 | 0.0 | 27.319017 | 2 |
ACATGGG | 21135 | 0.0 | 26.686512 | 3 |
ACGCAGA | 11710 | 0.0 | 24.443295 | 7 |
CATGGGG | 14260 | 0.0 | 23.171204 | 4 |
CGCAGAG | 12460 | 0.0 | 22.594604 | 8 |
GAGTACA | 14480 | 0.0 | 19.24859 | 1 |
GCAGAGT | 14860 | 0.0 | 18.31284 | 9 |
AGTACAT | 14565 | 0.0 | 17.845448 | 2 |
GTATATA | 4190 | 0.0 | 17.162882 | 1 |
TACACCG | 1165 | 0.0 | 16.541084 | 5 |
GTCGTAC | 600 | 0.0 | 16.450565 | 1 |
ACACCGT | 1235 | 0.0 | 16.364428 | 6 |