Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032976_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2430145 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 1955 | 0.0 | 35.581505 | 1 |
GTATCAA | 3145 | 0.0 | 35.120167 | 1 |
TCAACGC | 3100 | 0.0 | 33.50734 | 4 |
ATCAACG | 3240 | 0.0 | 32.20456 | 3 |
CAACGCA | 3300 | 0.0 | 31.475296 | 5 |
AACGCAG | 3485 | 0.0 | 29.669579 | 6 |
TATCAAC | 3810 | 0.0 | 27.63328 | 2 |
GTACATG | 7020 | 0.0 | 27.450869 | 1 |
TACATGG | 7035 | 0.0 | 26.25656 | 2 |
CGACCGT | 75 | 1.1639731E-6 | 25.0663 | 20-21 |
ACATGGG | 7090 | 0.0 | 24.793324 | 3 |
ACGCAGA | 4175 | 0.0 | 24.540956 | 7 |
CGCAGAG | 4360 | 0.0 | 23.499653 | 8 |
CATGGGG | 4635 | 0.0 | 18.759937 | 4 |
GAGTACA | 5135 | 0.0 | 18.39776 | 1 |
GCAGAGT | 5390 | 0.0 | 18.223846 | 9 |
AGTACAT | 5075 | 0.0 | 17.503912 | 2 |
GTCTAGG | 620 | 0.0 | 17.435946 | 1 |
TCCGGTC | 300 | 8.679308E-8 | 17.233082 | 8 |
TACACGG | 220 | 3.196184E-5 | 17.091362 | 2 |