Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032974_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4054482 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTACATG | 13455 | 0.0 | 29.413448 | 1 |
TACATGG | 13830 | 0.0 | 27.46039 | 2 |
ACATGGG | 13985 | 0.0 | 26.248596 | 3 |
GTATCAA | 8530 | 0.0 | 24.851068 | 1 |
TCAACGC | 8330 | 0.0 | 24.601355 | 4 |
ATCAACG | 8440 | 0.0 | 24.33641 | 3 |
CAACGCA | 8545 | 0.0 | 23.927061 | 5 |
AACGCAG | 8805 | 0.0 | 23.273335 | 6 |
CATGGGG | 8960 | 0.0 | 22.66174 | 4 |
TATCAAC | 9840 | 0.0 | 21.256044 | 2 |
GAGTACA | 9565 | 0.0 | 20.540396 | 1 |
GGTATCA | 6100 | 0.0 | 20.110748 | 1 |
ACGCAGA | 10150 | 0.0 | 20.004107 | 7 |
CGCAGAG | 10595 | 0.0 | 18.89775 | 8 |
AGTACAT | 9740 | 0.0 | 18.820154 | 2 |
GTATAGA | 1835 | 0.0 | 18.698395 | 1 |
GTATAGG | 1660 | 0.0 | 17.271866 | 1 |
TATACTG | 2460 | 0.0 | 16.6225 | 5 |
TACCTGG | 2720 | 0.0 | 16.588987 | 2 |
TCTATAC | 1660 | 0.0 | 16.42243 | 3 |