Basic Statistics
Measure | Value |
---|---|
Filename | SRR1032974_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4054482 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 7905 | 0.1949694190281274 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 6533 | 0.16113032441628794 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 8860 | 0.0 | 36.05661 | 1 |
GTATCAA | 14445 | 0.0 | 34.27937 | 1 |
ATCAACG | 16055 | 0.0 | 30.291704 | 3 |
TCAACGC | 16075 | 0.0 | 30.22476 | 4 |
CAACGCA | 16390 | 0.0 | 29.612614 | 5 |
AACGCAG | 16860 | 0.0 | 28.842901 | 6 |
TATCAAC | 17205 | 0.0 | 28.403664 | 2 |
GTACATG | 13525 | 0.0 | 26.781002 | 1 |
TACATGG | 13460 | 0.0 | 25.683594 | 2 |
ACGCAGA | 19235 | 0.0 | 25.23175 | 7 |
ACATGGG | 13370 | 0.0 | 24.449327 | 3 |
CGCAGAG | 19775 | 0.0 | 24.400051 | 8 |
GCAGAGT | 21220 | 0.0 | 22.469194 | 9 |
GAGTACT | 12015 | 0.0 | 20.936686 | 12-13 |
AGAGTAC | 17040 | 0.0 | 20.579134 | 10-11 |
GAGTACA | 9780 | 0.0 | 20.27138 | 1 |
CATGGGG | 8930 | 0.0 | 19.961872 | 4 |
GTACTTT | 12770 | 0.0 | 19.60688 | 14-15 |
TACACCG | 750 | 0.0 | 19.439112 | 5 |
CGACGCG | 135 | 2.6175258E-8 | 19.13773 | 90-91 |